Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Gm43622-201ENSMUST00000200140 2019 ntBASIC16.35■□□□□ 0.21
Ccdc9Q8VC31 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 AC124433.1-202ENSMUST00000224762 1535 ntBASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc9Q8VC31 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc9Q8VC31 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc9Q8VC31 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc9Q8VC31 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc9Q8VC31 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc9Q8VC31 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm8318-201ENSMUST00000182954 872 ntBASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc9Q8VC31 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Gm37472-201ENSMUST00000192342 4052 ntBASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc9Q8VC31 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms