Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Gm6973-201ENSMUST00000117080 721 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Rpph1-201ENSMUST00000175096 319 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Matn2-203ENSMUST00000226766 3252 ntBASIC12.21□□□□□ -0.45
Ccdc58Q8R3Q6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc58Q8R3Q6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc58Q8R3Q6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Gm14140-201ENSMUST00000119999 995 ntBASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Gm17968-201ENSMUST00000194902 784 ntBASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms