Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Chchd1-203ENSMUST00000224633 557 ntBASIC16.84■□□□□ 0.29
Smc5Q8CG46 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.84■□□□□ 0.29
Smc5Q8CG46 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.83■□□□□ 0.29
Smc5Q8CG46 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smc5Q8CG46 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Gm15393-201ENSMUST00000120499 219 ntBASIC16.83■□□□□ 0.28
Smc5Q8CG46 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.83■□□□□ 0.28
Smc5Q8CG46 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.83■□□□□ 0.28
Smc5Q8CG46 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smc5Q8CG46 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Gm7774-201ENSMUST00000200064 533 ntBASIC16.82■□□□□ 0.28
Smc5Q8CG46 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.82■□□□□ 0.28
Smc5Q8CG46 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smc5Q8CG46 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc5Q8CG46 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc5Q8CG46 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms