Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps53Q8CCB4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Gm9002-201ENSMUST00000178437 499 ntBASIC15.84■□□□□ 0.13
Vps53Q8CCB4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps53Q8CCB4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Vps53Q8CCB4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm17150-201ENSMUST00000165577 381 ntBASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps53Q8CCB4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms