Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim9Q8C7M3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm14057-201ENSMUST00000120631 482 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm15376-201ENSMUST00000122258 783 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm42612-201ENSMUST00000197986 623 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm43170-201ENSMUST00000199827 612 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm19078-201ENSMUST00000206311 727 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim9Q8C7M3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm12485-201ENSMUST00000119641 291 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm26464-201ENSMUST00000157094 305 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm16215-201ENSMUST00000161990 637 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Auts2-212ENSMUST00000178555 309 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm5161-201ENSMUST00000075243 853 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm13730-201ENSMUST00000121036 1462 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Gm3365-201ENSMUST00000216296 1480 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15□□□□□ -0.01
Trim9Q8C7M3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim9Q8C7M3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim9Q8C7M3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.99□□□□□ -0.01
Trim9Q8C7M3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms