Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Gm6244-201ENSMUST00000178732 841 ntBASIC15.08■□□□□ 0
Trim47Q8C0E3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Gm29608-201ENSMUST00000190444 463 ntBASIC15.08■□□□□ 0
Trim47Q8C0E3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm8602-201ENSMUST00000184045 607 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm27892-201ENSMUST00000185017 106 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.07■□□□□ 0
Trim47Q8C0E3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.07■□□□□ 0
Trim47Q8C0E3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim47Q8C0E3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm44397-201ENSMUST00000195950 113 ntBASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.06■□□□□ 0
Trim47Q8C0E3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.06■□□□□ 0
Trim47Q8C0E3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim47Q8C0E3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.06■□□□□ 0
Trim47Q8C0E3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms