Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trerf1Q8BXJ2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Mir7684-201ENSMUST00000183858 60 ntBASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Trerf1Q8BXJ2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gm27321-201ENSMUST00000185021 205 ntBASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gm7775-201ENSMUST00000218871 853 ntBASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.4□□□□□ -0.1
Trerf1Q8BXJ2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trerf1Q8BXJ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms