Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.13□□□□□ -0.47
Ube3dQ8BX13 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gm9522-201ENSMUST00000182394 926 ntBASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.13□□□□□ -0.47
Ube3dQ8BX13 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gm20614-201ENSMUST00000177106 632 ntBASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.12□□□□□ -0.47
Ube3dQ8BX13 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.12□□□□□ -0.47
Ube3dQ8BX13 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube3dQ8BX13 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm15393-201ENSMUST00000120499 219 ntBASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.11□□□□□ -0.47
Ube3dQ8BX13 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms