Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm2810-201ENSMUST00000118681 990 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm37629-201ENSMUST00000193635 1050 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Gm43514-201ENSMUST00000198852 424 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm11Q8BUV6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Lsm11Q8BUV6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm28975-201ENSMUST00000186412 686 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 AC132881.2-201ENSMUST00000225474 709 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm11Q8BUV6 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms