Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup54Q8BTS4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nup54Q8BTS4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup54Q8BTS4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup54Q8BTS4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup54Q8BTS4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.91□□□□□ -0.18
Nup54Q8BTS4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Gm8463-201ENSMUST00000208573 613 ntBASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup54Q8BTS4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm12928-201ENSMUST00000117115 573 ntBASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm29608-201ENSMUST00000190444 463 ntBASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup54Q8BTS4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nup54Q8BTS4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Gm15806-201ENSMUST00000120696 955 ntBASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Gm9002-201ENSMUST00000178437 499 ntBASIC13.89□□□□□ -0.19
Nup54Q8BTS4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Nup54Q8BTS4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms