Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cpsf4Q8BQZ5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Cpsf4Q8BQZ5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm7063-201ENSMUST00000186840 981 ntBASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4Q8BQZ5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4Q8BQZ5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cpsf4Q8BQZ5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4Q8BQZ5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.21□□□□□ -0.3
Cpsf4Q8BQZ5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Cpsf4Q8BQZ5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4Q8BQZ5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms