Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.99■□□□□ 0.63
Usp54Q8BL06 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Gm37133-201ENSMUST00000192705 1922 ntBASIC18.99■□□□□ 0.63
Usp54Q8BL06 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC18.99■□□□□ 0.63
Usp54Q8BL06 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm12502-201ENSMUST00000120197 444 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm15276-201ENSMUST00000145953 498 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm43138-201ENSMUST00000199123 708 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm10782-202ENSMUST00000223775 1480 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Gm19963-201ENSMUST00000208413 1255 ntBASIC18.98■□□□□ 0.63
Usp54Q8BL06 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp54Q8BL06 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Gm13097-201ENSMUST00000210722 397 ntBASIC18.97■□□□□ 0.63
Usp54Q8BL06 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.97■□□□□ 0.63
Usp54Q8BL06 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp54Q8BL06 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Gm12217-201ENSMUST00000118858 696 ntBASIC18.96■□□□□ 0.63
Usp54Q8BL06 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Usp54Q8BL06 Gm26956-201ENSMUST00000182176 986 ntBASIC18.96■□□□□ 0.63
Usp54Q8BL06 Mir6979-201ENSMUST00000183927 56 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms