Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr3Q8BL00 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr3Q8BL00 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdhr3Q8BL00 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cdhr3Q8BL00 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Cdhr3Q8BL00 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdhr3Q8BL00 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cdhr3Q8BL00 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm24543-201ENSMUST00000103867 82 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm43474-201ENSMUST00000196415 774 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm44335-201ENSMUST00000196879 141 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm44297-201ENSMUST00000198304 141 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm44346-201ENSMUST00000198851 141 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdhr3Q8BL00 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22065-201ENSMUST00000103753 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22066-201ENSMUST00000103761 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24932-201ENSMUST00000103763 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24115-201ENSMUST00000103799 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22190-201ENSMUST00000103827 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22191-201ENSMUST00000103831 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24721-201ENSMUST00000103849 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm28018-201ENSMUST00000103869 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm26399-201ENSMUST00000103937 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25349-201ENSMUST00000177728 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm23616-201ENSMUST00000177797 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25871-201ENSMUST00000177816 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24752-201ENSMUST00000178240 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24496-201ENSMUST00000178287 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25649-201ENSMUST00000178476 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25548-201ENSMUST00000178681 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm23147-201ENSMUST00000178841 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm26095-201ENSMUST00000179270 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22171-201ENSMUST00000179283 110 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms