Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm15131-201ENSMUST00000119124 595 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm37042-201ENSMUST00000193816 581 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Gm5781-201ENSMUST00000219792 443 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smg1Q8BKX6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gm12795-201ENSMUST00000117594 539 ntBASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smg1Q8BKX6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm25880-201ENSMUST00000104331 132 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms