Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Gm21470-201ENSMUST00000187680 696 ntBASIC13.05□□□□□ -0.32
SynbQ8BI41 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.05□□□□□ -0.32
SynbQ8BI41 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.05□□□□□ -0.32
SynbQ8BI41 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SynbQ8BI41 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SynbQ8BI41 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
SynbQ8BI41 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm11425-201ENSMUST00000119608 498 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm12882-201ENSMUST00000121696 517 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm27892-201ENSMUST00000185017 106 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm18307-201ENSMUST00000206864 949 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm9396-201ENSMUST00000076703 567 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm5356-201ENSMUST00000093326 615 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
SynbQ8BI41 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.04□□□□□ -0.32
SynbQ8BI41 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SynbQ8BI41 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.04□□□□□ -0.32
SynbQ8BI41 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.03□□□□□ -0.32
SynbQ8BI41 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.03□□□□□ -0.32
SynbQ8BI41 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.03□□□□□ -0.32
SynbQ8BI41 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.03□□□□□ -0.32
SynbQ8BI41 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Gm17794-201ENSMUST00000220252 955 ntBASIC13.03□□□□□ -0.32
SynbQ8BI41 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.03□□□□□ -0.32
SynbQ8BI41 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SynbQ8BI41 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SynbQ8BI41 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms