Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Gm14701-201ENSMUST00000117156 348 ntBASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Gm24158-201ENSMUST00000175263 71 ntBASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf38Q8BI21 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf38Q8BI21 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Mir1897-201ENSMUST00000122581 272 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm10253-201ENSMUST00000194270 940 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm5779-201ENSMUST00000218467 910 ntBASIC13.15□□□□□ -0.3
Rnf38Q8BI21 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms