Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Gm6916-202ENSMUST00000205523 195 ntBASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Samm50Q8BGH2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Gm15487-201ENSMUST00000122373 465 ntBASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.97■□□□□ 0.15
Samm50Q8BGH2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gm27838-201ENSMUST00000184829 128 ntBASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.96■□□□□ 0.15
Samm50Q8BGH2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.96■□□□□ 0.14
Samm50Q8BGH2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Samm50Q8BGH2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Samm50Q8BGH2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Samm50Q8BGH2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Samm50Q8BGH2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Gm7063-201ENSMUST00000186840 981 ntBASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Gm33320-201ENSMUST00000192232 530 ntBASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Gm43703-201ENSMUST00000200523 763 ntBASIC15.95■□□□□ 0.14
Samm50Q8BGH2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Samm50Q8BGH2 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms