Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Gm29741-201ENSMUST00000192667 421 ntBASIC14.46□□□□□ -0.09
Trim6Q8BGE7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim6Q8BGE7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim6Q8BGE7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim6Q8BGE7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim6Q8BGE7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.44□□□□□ -0.1
Trim6Q8BGE7 Gm18027-201ENSMUST00000218947 619 ntBASIC14.44□□□□□ -0.1
Trim6Q8BGE7 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms