Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trnp1Q80ZI1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm14028-201ENSMUST00000117434 479 ntBASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trnp1Q80ZI1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trnp1Q80ZI1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trnp1Q80ZI1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trnp1Q80ZI1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trnp1Q80ZI1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trnp1Q80ZI1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Gm14263-201ENSMUST00000117955 746 ntBASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Gm38317-201ENSMUST00000195564 343 ntBASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Gm19208-201ENSMUST00000213861 912 ntBASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trnp1Q80ZI1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms