Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.01□□□□□ -0.33
Vrk1Q80X41 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm24644-201ENSMUST00000157114 139 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm9124-201ENSMUST00000191789 1092 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Gm9113-201ENSMUST00000192510 1018 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Gm9131-201ENSMUST00000193557 1089 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Gm9121-201ENSMUST00000193749 1071 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm18473-201ENSMUST00000220543 868 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vrk1Q80X41 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Mmp14-206ENSMUST00000225641 3238 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vrk1Q80X41 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Gm37411-201ENSMUST00000194180 2282 ntBASIC13□□□□□ -0.33
Vrk1Q80X41 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13□□□□□ -0.33
Vrk1Q80X41 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk1Q80X41 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vrk1Q80X41 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.99□□□□□ -0.33
Vrk1Q80X41 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk1Q80X41 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gm40466-201ENSMUST00000212174 422 ntBASIC12.98□□□□□ -0.33
Vrk1Q80X41 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms