Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gm25857-201ENSMUST00000082788 129 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh19Q80TF3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh19Q80TF3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh19Q80TF3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh19Q80TF3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh19Q80TF3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms