Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.13□□□□□ -0.15
Cspg5Q71M36 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.13□□□□□ -0.15
Cspg5Q71M36 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Gm10478-201ENSMUST00000084451 396 ntBASIC14.13□□□□□ -0.15
Cspg5Q71M36 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg5Q71M36 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.12□□□□□ -0.15
Cspg5Q71M36 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gm17794-201ENSMUST00000220252 955 ntBASIC14.12□□□□□ -0.15
Cspg5Q71M36 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.12□□□□□ -0.15
Cspg5Q71M36 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.12□□□□□ -0.15
Cspg5Q71M36 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg5Q71M36 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.12□□□□□ -0.15
Cspg5Q71M36 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.11□□□□□ -0.15
Cspg5Q71M36 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm15429-201ENSMUST00000151268 798 ntBASIC14.11□□□□□ -0.15
Cspg5Q71M36 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Gm10275-202ENSMUST00000168697 495 ntBASIC14.11□□□□□ -0.15
Cspg5Q71M36 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.11□□□□□ -0.15
Cspg5Q71M36 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms