Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm24548-201ENSMUST00000158650 108 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm3786-201ENSMUST00000202659 378 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.4■□□□□ 0.06
Ddx55Q6ZPL9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ddx55Q6ZPL9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm11964-201ENSMUST00000120982 444 ntBASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm4768-201ENSMUST00000206199 686 ntBASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm5781-201ENSMUST00000219792 443 ntBASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Morn2-202ENSMUST00000227729 656 ntBASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx55Q6ZPL9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms