Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.21■□□□□ 0.35
Clcn1Q64347 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.21■□□□□ 0.35
Clcn1Q64347 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.21■□□□□ 0.35
Clcn1Q64347 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Gm5687-201ENSMUST00000118252 640 ntBASIC17.21■□□□□ 0.35
Clcn1Q64347 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Gm43930-201ENSMUST00000203868 845 ntBASIC17.21■□□□□ 0.35
Clcn1Q64347 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn1Q64347 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clcn1Q64347 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clcn1Q64347 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Gm19087-201ENSMUST00000191430 946 ntBASIC17.2■□□□□ 0.34
Clcn1Q64347 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.2■□□□□ 0.34
Clcn1Q64347 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn1Q64347 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn1Q64347 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms