Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VcanQ62059 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.47□□□□□ -0.41
VcanQ62059 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VcanQ62059 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VcanQ62059 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VcanQ62059 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.47□□□□□ -0.41
VcanQ62059 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.47□□□□□ -0.41
VcanQ62059 Gm27046-201ENSMUST00000182160 463 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Gm43610-201ENSMUST00000199117 365 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.47□□□□□ -0.41
VcanQ62059 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VcanQ62059 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.47□□□□□ -0.41
VcanQ62059 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
VcanQ62059 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
VcanQ62059 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.46□□□□□ -0.41
VcanQ62059 Gm8738-201ENSMUST00000172606 329 ntBASIC12.46□□□□□ -0.41
VcanQ62059 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.46□□□□□ -0.41
VcanQ62059 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VcanQ62059 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
VcanQ62059 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.46□□□□□ -0.42
VcanQ62059 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.46□□□□□ -0.42
VcanQ62059 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.46□□□□□ -0.42
VcanQ62059 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.46□□□□□ -0.42
VcanQ62059 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 Mir671-201ENSMUST00000102432 98 ntBASIC12.46□□□□□ -0.42
VcanQ62059 Gm12948-201ENSMUST00000119406 682 ntBASIC12.46□□□□□ -0.42
VcanQ62059 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VcanQ62059 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.46□□□□□ -0.42
VcanQ62059 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.46□□□□□ -0.42
VcanQ62059 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
VcanQ62059 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.45□□□□□ -0.42
VcanQ62059 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VcanQ62059 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.45□□□□□ -0.42
VcanQ62059 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.45□□□□□ -0.42
VcanQ62059 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.45□□□□□ -0.42
VcanQ62059 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VcanQ62059 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.45□□□□□ -0.42
VcanQ62059 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VcanQ62059 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.45□□□□□ -0.42
VcanQ62059 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms