Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 Gm7561-201ENSMUST00000211203 886 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm15376-201ENSMUST00000122258 783 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.47□□□□□ -0.73
Notch3Q61982 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Notch3Q61982 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.47□□□□□ -0.73
Notch3Q61982 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Notch3Q61982 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Notch3Q61982 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.46□□□□□ -0.73
Notch3Q61982 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.46□□□□□ -0.73
Notch3Q61982 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.46□□□□□ -0.73
Notch3Q61982 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.46□□□□□ -0.73
Notch3Q61982 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Notch3Q61982 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Notch3Q61982 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.46□□□□□ -0.73
Notch3Q61982 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Notch3Q61982 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Notch3Q61982 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms