Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.98□□□□□ -0.33
Nr1h4Q60641 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.98□□□□□ -0.33
Nr1h4Q60641 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.97□□□□□ -0.33
Nr1h4Q60641 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Mir698-201ENSMUST00000102164 109 ntBASIC12.97□□□□□ -0.33
Nr1h4Q60641 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.97□□□□□ -0.33
Nr1h4Q60641 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nr1h4Q60641 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.96□□□□□ -0.33
Nr1h4Q60641 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms