Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav5d-4Q5R1F6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mir6956-201ENSMUST00000183598 62 ntBASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Gm44719-201ENSMUST00000206404 149 ntBASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Gm7775-201ENSMUST00000218871 853 ntBASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Gm9063-201ENSMUST00000223299 582 ntBASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav5d-4Q5R1F6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Gm4875-201ENSMUST00000118257 786 ntBASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav5d-4Q5R1F6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav5d-4Q5R1F6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav5d-4Q5R1F6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms