Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Gm11780-201ENSMUST00000136880 516 ntBASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Gm10499-201ENSMUST00000174094 934 ntBASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Trav3-3Q5R1C3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-3Q5R1C3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav3-3Q5R1C3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms