Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim58Q5NCC9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim58Q5NCC9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gm15920-201ENSMUST00000118998 402 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gm14719-201ENSMUST00000121891 340 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Mir8102-201ENSMUST00000184148 139 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gm20445-201ENSMUST00000061905 565 ntBASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim58Q5NCC9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim58Q5NCC9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim58Q5NCC9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Trim58Q5NCC9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim58Q5NCC9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim58Q5NCC9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms