Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Rc3h1Q4VGL6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
Rc3h1Q4VGL6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h1Q4VGL6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rc3h1Q4VGL6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Rc3h1Q4VGL6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Itm2b-204ENSMUST00000228637 783 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rc3h1Q4VGL6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm13226-201ENSMUST00000117838 404 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm29649-201ENSMUST00000185649 419 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 AY702102-202ENSMUST00000194651 1173 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rc3h1Q4VGL6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Matn2-206ENSMUST00000228570 2798 ntBASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms