Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fam196aQ3USH1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12616-201ENSMUST00000118594 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12403-201ENSMUST00000121384 959 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm24548-201ENSMUST00000158650 108 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12624-201ENSMUST00000177615 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12621-201ENSMUST00000177760 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12615-201ENSMUST00000177970 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12622-201ENSMUST00000177975 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12627-201ENSMUST00000178412 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12625-201ENSMUST00000179122 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12614-201ENSMUST00000179586 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm12613-201ENSMUST00000180323 382 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm44967-201ENSMUST00000207047 631 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.62□□□□□ -0.23
Fam196aQ3USH1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm18584-201ENSMUST00000203098 964 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fam196aQ3USH1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms