Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm12012-201ENSMUST00000118857 1066 ntBASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 B9d1os-201ENSMUST00000137010 674 ntBASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm38297-201ENSMUST00000195122 1057 ntBASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Arhgef40Q3UPH7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Gm8228-201ENSMUST00000189949 2192 ntBASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Arhgef40Q3UPH7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Arhgef40Q3UPH7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Arhgef40Q3UPH7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Arhgef40Q3UPH7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Arhgef40Q3UPH7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Mir7032-201ENSMUST00000185154 79 ntBASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Arhgef40Q3UPH7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Gm2260-201ENSMUST00000184965 657 ntBASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Arhgef40Q3UPH7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gm11531-201ENSMUST00000117614 555 ntBASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gm13875-201ENSMUST00000120162 282 ntBASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms