Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nlrc4Q3UP24 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Nlrc4Q3UP24 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nlrc4Q3UP24 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nlrc4Q3UP24 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Gm45384-201ENSMUST00000210451 277 ntBASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nlrc4Q3UP24 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm12490-201ENSMUST00000120255 560 ntBASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nlrc4Q3UP24 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gm29608-201ENSMUST00000190444 463 ntBASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms