Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q3KNL4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q3KNL4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Q3KNL4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q3KNL4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q3KNL4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.39□□□□□ -0.27
Q3KNL4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Q3KNL4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gm6415-201ENSMUST00000118488 348 ntBASIC13.38□□□□□ -0.27
Q3KNL4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Q3KNL4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Q3KNL4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3KNL4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3KNL4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Q3KNL4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.37□□□□□ -0.27
Q3KNL4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.37□□□□□ -0.27
Q3KNL4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Q3KNL4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.37□□□□□ -0.27
Q3KNL4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.37□□□□□ -0.27
Q3KNL4 Gm2756-201ENSMUST00000195851 400 ntBASIC13.37□□□□□ -0.27
Q3KNL4 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.37□□□□□ -0.27
Q3KNL4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.37□□□□□ -0.27
Q3KNL4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
Q3KNL4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Q3KNL4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3KNL4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3KNL4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3KNL4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms