Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptchd3Q0EEE2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm43474-201ENSMUST00000196415 774 ntBASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm43575-201ENSMUST00000196420 516 ntBASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptchd3Q0EEE2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
Ptchd3Q0EEE2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ptchd3Q0EEE2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptchd3Q0EEE2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms