Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.39□□□□□ -0.27
Col9a1Q05722 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm13033-201ENSMUST00000117591 1057 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm12628-201ENSMUST00000122193 382 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm23153-201ENSMUST00000175323 313 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC13.38□□□□□ -0.27
Col9a1Q05722 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm43787-201ENSMUST00000197792 1037 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Mt1-202ENSMUST00000211807 1085 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 AC165260.4-201ENSMUST00000225924 724 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col9a1Q05722 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.38□□□□□ -0.27
Col9a1Q05722 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.38□□□□□ -0.27
Col9a1Q05722 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col9a1Q05722 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm13313-201ENSMUST00000118938 1084 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm14739-201ENSMUST00000120424 802 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.37□□□□□ -0.27
Col9a1Q05722 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm23218-201ENSMUST00000158124 276 ntBASIC13.37□□□□□ -0.27
Col9a1Q05722 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.37□□□□□ -0.27
Col9a1Q05722 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.37□□□□□ -0.27
Col9a1Q05722 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.37□□□□□ -0.27
Col9a1Q05722 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms