Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msx2Q03358 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msx2Q03358 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msx2Q03358 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 BC001981-202ENSMUST00000191393 1545 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm15427-201ENSMUST00000117288 531 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Gm13823-201ENSMUST00000119930 345 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.2□□□□□ -0.3
Msx2Q03358 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Msx2Q03358 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Msx2Q03358 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Msx2Q03358 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msx2Q03358 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Msx2Q03358 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.19□□□□□ -0.3
Msx2Q03358 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.19□□□□□ -0.3
Msx2Q03358 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.19□□□□□ -0.3
Msx2Q03358 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.19□□□□□ -0.3
Msx2Q03358 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Msx2Q03358 Gm29741-201ENSMUST00000192667 421 ntBASIC13.19□□□□□ -0.3
Msx2Q03358 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.19□□□□□ -0.3
Msx2Q03358 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Msx2Q03358 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.19□□□□□ -0.3
Msx2Q03358 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx2Q03358 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.18□□□□□ -0.3
Msx2Q03358 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.18□□□□□ -0.3
Msx2Q03358 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msx2Q03358 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.18□□□□□ -0.3
Msx2Q03358 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.18□□□□□ -0.3
Msx2Q03358 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.18□□□□□ -0.3
Msx2Q03358 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msx2Q03358 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msx2Q03358 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx2Q03358 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.18□□□□□ -0.3
Msx2Q03358 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msx2Q03358 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx2Q03358 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms