Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.53□□□□□ -0.08
VcpQ01853 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VcpQ01853 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VcpQ01853 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.53□□□□□ -0.08
VcpQ01853 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.53□□□□□ -0.08
VcpQ01853 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VcpQ01853 Gm45784-201ENSMUST00000188360 142 ntBASIC14.53□□□□□ -0.08
VcpQ01853 Gm33320-201ENSMUST00000192232 530 ntBASIC14.53□□□□□ -0.08
VcpQ01853 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VcpQ01853 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.53□□□□□ -0.08
VcpQ01853 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.53□□□□□ -0.08
VcpQ01853 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.53□□□□□ -0.08
VcpQ01853 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcpQ01853 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
VcpQ01853 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
VcpQ01853 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VcpQ01853 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.52□□□□□ -0.08
VcpQ01853 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VcpQ01853 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VcpQ01853 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.52□□□□□ -0.08
VcpQ01853 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.52□□□□□ -0.08
VcpQ01853 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VcpQ01853 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
VcpQ01853 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
VcpQ01853 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VcpQ01853 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.52□□□□□ -0.09
VcpQ01853 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.52□□□□□ -0.09
VcpQ01853 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VcpQ01853 Gm6244-201ENSMUST00000178732 841 ntBASIC14.52□□□□□ -0.09
VcpQ01853 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.52□□□□□ -0.09
VcpQ01853 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.52□□□□□ -0.09
VcpQ01853 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.52□□□□□ -0.09
VcpQ01853 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VcpQ01853 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VcpQ01853 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VcpQ01853 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.51□□□□□ -0.09
VcpQ01853 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
VcpQ01853 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VcpQ01853 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VcpQ01853 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VcpQ01853 Gm15460-201ENSMUST00000118147 391 ntBASIC14.51□□□□□ -0.09
VcpQ01853 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VcpQ01853 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VcpQ01853 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.51□□□□□ -0.09
VcpQ01853 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.51□□□□□ -0.09
VcpQ01853 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VcpQ01853 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms