Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.42□□□□□ -0.58
SgcaP82350 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
SgcaP82350 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
SgcaP82350 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.41□□□□□ -0.58
SgcaP82350 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SgcaP82350 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
SgcaP82350 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SgcaP82350 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.41□□□□□ -0.58
SgcaP82350 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcaP82350 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
SgcaP82350 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SgcaP82350 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Gm15483-201ENSMUST00000120338 456 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Gm12882-201ENSMUST00000121696 517 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.4□□□□□ -0.58
SgcaP82350 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.4□□□□□ -0.58
SgcaP82350 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.4□□□□□ -0.58
SgcaP82350 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.4□□□□□ -0.58
SgcaP82350 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.4□□□□□ -0.58
SgcaP82350 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.4□□□□□ -0.58
SgcaP82350 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcaP82350 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgcaP82350 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgcaP82350 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcaP82350 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcaP82350 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.4□□□□□ -0.59
SgcaP82350 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcaP82350 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcaP82350 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.4□□□□□ -0.59
SgcaP82350 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcaP82350 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms