Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SgcdP82347 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcdP82347 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.65□□□□□ -0.38
SgcdP82347 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SgcdP82347 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SgcdP82347 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.65□□□□□ -0.38
SgcdP82347 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcdP82347 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.65□□□□□ -0.38
SgcdP82347 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.65□□□□□ -0.38
SgcdP82347 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SgcdP82347 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcdP82347 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SgcdP82347 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SgcdP82347 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.65□□□□□ -0.39
SgcdP82347 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.65□□□□□ -0.39
SgcdP82347 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SgcdP82347 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
SgcdP82347 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SgcdP82347 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SgcdP82347 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.64□□□□□ -0.39
SgcdP82347 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 Mir6990-201ENSMUST00000183724 91 ntBASIC12.64□□□□□ -0.39
SgcdP82347 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.64□□□□□ -0.39
SgcdP82347 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.64□□□□□ -0.39
SgcdP82347 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.64□□□□□ -0.39
SgcdP82347 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SgcdP82347 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SgcdP82347 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcdP82347 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcdP82347 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms