Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Stra8P70278 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.82■□□□□ 0.6
Stra8P70278 Gm6415-201ENSMUST00000118488 348 ntBASIC18.82■□□□□ 0.6
Stra8P70278 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Stra8P70278 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.82■□□□□ 0.6
Stra8P70278 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.82■□□□□ 0.6
Stra8P70278 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.82■□□□□ 0.6
Stra8P70278 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Stra8P70278 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stra8P70278 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Stra8P70278 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC18.81■□□□□ 0.6
Stra8P70278 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Stra8P70278 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC18.81■□□□□ 0.6
Stra8P70278 Gm8410-201ENSMUST00000117225 605 ntBASIC18.81■□□□□ 0.6
Stra8P70278 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.81■□□□□ 0.6
Stra8P70278 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Stra8P70278 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.81■□□□□ 0.6
Stra8P70278 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.81■□□□□ 0.6
Stra8P70278 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stra8P70278 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.8■□□□□ 0.6
Stra8P70278 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Stra8P70278 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Gm13616-201ENSMUST00000120600 222 ntBASIC18.8■□□□□ 0.6
Stra8P70278 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.8■□□□□ 0.6
Stra8P70278 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Stra8P70278 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Stra8P70278 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stra8P70278 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Stra8P70278 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Stra8P70278 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Stra8P70278 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.79■□□□□ 0.6
Stra8P70278 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.79■□□□□ 0.6
Stra8P70278 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Stra8P70278 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Gm6222-201ENSMUST00000120787 396 ntBASIC18.79■□□□□ 0.6
Stra8P70278 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.79■□□□□ 0.6
Stra8P70278 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.79■□□□□ 0.6
Stra8P70278 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.79■□□□□ 0.6
Stra8P70278 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Stra8P70278 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Gm38355-201ENSMUST00000192514 1570 ntBASIC18.79■□□□□ 0.6
Stra8P70278 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stra8P70278 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms