Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm7730-201ENSMUST00000212486 454 ntBASIC12.75□□□□□ -0.37
Six5P70178 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.75□□□□□ -0.37
Six5P70178 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.75□□□□□ -0.37
Six5P70178 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.75□□□□□ -0.37
Six5P70178 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six5P70178 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Six5P70178 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.74□□□□□ -0.37
Six5P70178 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Six5P70178 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Six5P70178 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Six5P70178 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Gm16215-201ENSMUST00000161990 637 ntBASIC12.74□□□□□ -0.37
Six5P70178 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Gm5354-201ENSMUST00000182417 973 ntBASIC12.74□□□□□ -0.37
Six5P70178 Gm27437-201ENSMUST00000183429 107 ntBASIC12.74□□□□□ -0.37
Six5P70178 Mir6977-201ENSMUST00000184960 64 ntBASIC12.74□□□□□ -0.37
Six5P70178 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Six5P70178 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.74□□□□□ -0.37
Six5P70178 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.74□□□□□ -0.37
Six5P70178 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.74□□□□□ -0.37
Six5P70178 Gm19220-201ENSMUST00000222682 803 ntBASIC12.74□□□□□ -0.37
Six5P70178 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Six5P70178 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Six5P70178 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Six5P70178 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Six5P70178 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Six5P70178 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.73□□□□□ -0.37
Six5P70178 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.73□□□□□ -0.37
Six5P70178 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.73□□□□□ -0.37
Six5P70178 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.73□□□□□ -0.37
Six5P70178 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Six5P70178 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Six5P70178 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.73□□□□□ -0.37
Six5P70178 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Six5P70178 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Six5P70178 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Six5P70178 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Six5P70178 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms