Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lsm6P62313 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.96□□□□□ -0.49
Lsm6P62313 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.96□□□□□ -0.49
Lsm6P62313 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm6P62313 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lsm6P62313 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lsm6P62313 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm6P62313 Mir8102-201ENSMUST00000184148 139 ntBASIC11.96□□□□□ -0.49
Lsm6P62313 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm6P62313 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm6P62313 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lsm6P62313 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm6P62313 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.96□□□□□ -0.5
Lsm6P62313 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Lsm6P62313 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm6P62313 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm6P62313 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.96□□□□□ -0.5
Lsm6P62313 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.96□□□□□ -0.5
Lsm6P62313 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm6P62313 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.95□□□□□ -0.5
Lsm6P62313 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.95□□□□□ -0.5
Lsm6P62313 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.95□□□□□ -0.5
Lsm6P62313 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Gm27838-201ENSMUST00000184829 128 ntBASIC11.95□□□□□ -0.5
Lsm6P62313 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.95□□□□□ -0.5
Lsm6P62313 Gm17795-201ENSMUST00000214505 757 ntBASIC11.95□□□□□ -0.5
Lsm6P62313 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.95□□□□□ -0.5
Lsm6P62313 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm6P62313 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Lsm6P62313 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lsm6P62313 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm6P62313 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm6P62313 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm6P62313 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm6P62313 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm6P62313 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm6P62313 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm6P62313 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.94□□□□□ -0.5
Lsm6P62313 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm6P62313 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms