Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.66□□□□□ -0.22
SmoP56726 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.66□□□□□ -0.22
SmoP56726 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SmoP56726 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.66□□□□□ -0.22
SmoP56726 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SmoP56726 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SmoP56726 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SmoP56726 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SmoP56726 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.65□□□□□ -0.22
SmoP56726 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.65□□□□□ -0.22
SmoP56726 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.65□□□□□ -0.22
SmoP56726 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Gm13612-201ENSMUST00000119276 390 ntBASIC13.65□□□□□ -0.22
SmoP56726 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.65□□□□□ -0.22
SmoP56726 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.65□□□□□ -0.22
SmoP56726 Gm17150-201ENSMUST00000165577 381 ntBASIC13.65□□□□□ -0.22
SmoP56726 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.65□□□□□ -0.22
SmoP56726 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.65□□□□□ -0.22
SmoP56726 Gm26315-201ENSMUST00000083890 321 ntBASIC13.65□□□□□ -0.22
SmoP56726 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SmoP56726 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SmoP56726 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
SmoP56726 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SmoP56726 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SmoP56726 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SmoP56726 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.64□□□□□ -0.23
SmoP56726 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SmoP56726 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SmoP56726 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SmoP56726 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SmoP56726 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.64□□□□□ -0.23
SmoP56726 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.64□□□□□ -0.23
SmoP56726 Gm5687-201ENSMUST00000118252 640 ntBASIC13.64□□□□□ -0.23
SmoP56726 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.64□□□□□ -0.23
SmoP56726 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.64□□□□□ -0.23
SmoP56726 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SmoP56726 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.64□□□□□ -0.23
SmoP56726 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.64□□□□□ -0.23
SmoP56726 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.64□□□□□ -0.23
SmoP56726 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SmoP56726 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.64□□□□□ -0.23
SmoP56726 Gm18473-201ENSMUST00000220543 868 ntBASIC13.64□□□□□ -0.23
SmoP56726 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SmoP56726 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms