Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lim2P56563 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lim2P56563 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.62□□□□□ -0.23
Lim2P56563 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.62□□□□□ -0.23
Lim2P56563 Gm27772-201ENSMUST00000184900 187 ntBASIC13.62□□□□□ -0.23
Lim2P56563 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.62□□□□□ -0.23
Lim2P56563 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.62□□□□□ -0.23
Lim2P56563 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lim2P56563 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lim2P56563 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.62□□□□□ -0.23
Lim2P56563 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Lim2P56563 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lim2P56563 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lim2P56563 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Gm14928-201ENSMUST00000120198 477 ntBASIC13.61□□□□□ -0.23
Lim2P56563 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.61□□□□□ -0.23
Lim2P56563 Mir6392-201ENSMUST00000184924 108 ntBASIC13.61□□□□□ -0.23
Lim2P56563 Gm45668-201ENSMUST00000211271 493 ntBASIC13.61□□□□□ -0.23
Lim2P56563 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.61□□□□□ -0.23
Lim2P56563 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.61□□□□□ -0.23
Lim2P56563 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lim2P56563 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lim2P56563 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lim2P56563 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.6□□□□□ -0.23
Lim2P56563 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.6□□□□□ -0.23
Lim2P56563 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.6□□□□□ -0.23
Lim2P56563 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.6□□□□□ -0.23
Lim2P56563 Gm43094-201ENSMUST00000196549 921 ntBASIC13.6□□□□□ -0.23
Lim2P56563 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lim2P56563 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.6□□□□□ -0.23
Lim2P56563 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Lim2P56563 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lim2P56563 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lim2P56563 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Lim2P56563 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.6□□□□□ -0.23
Lim2P56563 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lim2P56563 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms