Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.67□□□□□ -0.06
Nub1P54729 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nub1P54729 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.67□□□□□ -0.06
Nub1P54729 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nub1P54729 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.67□□□□□ -0.06
Nub1P54729 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.67□□□□□ -0.06
Nub1P54729 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nub1P54729 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.67□□□□□ -0.06
Nub1P54729 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.67□□□□□ -0.06
Nub1P54729 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.67□□□□□ -0.06
Nub1P54729 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.67□□□□□ -0.06
Nub1P54729 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Nub1P54729 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nub1P54729 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nub1P54729 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.66□□□□□ -0.06
Nub1P54729 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.66□□□□□ -0.06
Nub1P54729 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Nub1P54729 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.66□□□□□ -0.06
Nub1P54729 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nub1P54729 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nub1P54729 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.66□□□□□ -0.06
Nub1P54729 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nub1P54729 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nub1P54729 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.65□□□□□ -0.06
Nub1P54729 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Nub1P54729 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.65□□□□□ -0.06
Nub1P54729 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 Gm5279-201ENSMUST00000199575 745 ntBASIC14.65□□□□□ -0.06
Nub1P54729 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.65□□□□□ -0.06
Nub1P54729 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nub1P54729 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
Nub1P54729 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.65□□□□□ -0.06
Nub1P54729 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.65□□□□□ -0.06
Nub1P54729 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nub1P54729 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nub1P54729 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nub1P54729 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms