Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CcnfP51944 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CcnfP51944 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CcnfP51944 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Gm13015-201ENSMUST00000118674 204 ntBASIC12.95□□□□□ -0.34
CcnfP51944 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.95□□□□□ -0.34
CcnfP51944 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.95□□□□□ -0.34
CcnfP51944 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.95□□□□□ -0.34
CcnfP51944 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.95□□□□□ -0.34
CcnfP51944 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.95□□□□□ -0.34
CcnfP51944 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CcnfP51944 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CcnfP51944 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
CcnfP51944 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CcnfP51944 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CcnfP51944 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CcnfP51944 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CcnfP51944 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.94□□□□□ -0.34
CcnfP51944 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.94□□□□□ -0.34
CcnfP51944 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Gm9727-201ENSMUST00000161387 555 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CcnfP51944 Mir8117-201ENSMUST00000184773 107 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.94□□□□□ -0.34
CcnfP51944 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CcnfP51944 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CcnfP51944 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CcnfP51944 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CcnfP51944 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.94□□□□□ -0.34
CcnfP51944 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcnfP51944 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.93□□□□□ -0.34
CcnfP51944 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.93□□□□□ -0.34
CcnfP51944 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Mir874-201ENSMUST00000104769 76 ntBASIC12.93□□□□□ -0.34
CcnfP51944 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.93□□□□□ -0.34
CcnfP51944 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.93□□□□□ -0.34
CcnfP51944 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnfP51944 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms