Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CntfP51642 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
CntfP51642 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.8□□□□□ -0.36
CntfP51642 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CntfP51642 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CntfP51642 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.79□□□□□ -0.36
CntfP51642 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.79□□□□□ -0.36
CntfP51642 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CntfP51642 Gm10253-201ENSMUST00000194270 940 ntBASIC12.79□□□□□ -0.36
CntfP51642 Dupd1-202ENSMUST00000224735 548 ntBASIC12.79□□□□□ -0.36
CntfP51642 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.79□□□□□ -0.36
CntfP51642 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CntfP51642 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CntfP51642 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CntfP51642 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
CntfP51642 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CntfP51642 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.78□□□□□ -0.36
CntfP51642 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CntfP51642 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Gm37714-201ENSMUST00000194742 342 ntBASIC12.78□□□□□ -0.36
CntfP51642 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.78□□□□□ -0.36
CntfP51642 Gm16476-201ENSMUST00000221544 139 ntBASIC12.78□□□□□ -0.36
CntfP51642 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CntfP51642 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.78□□□□□ -0.36
CntfP51642 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.78□□□□□ -0.36
CntfP51642 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CntfP51642 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CntfP51642 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CntfP51642 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CntfP51642 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.77□□□□□ -0.36
CntfP51642 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CntfP51642 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CntfP51642 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CntfP51642 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.36
CntfP51642 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CntfP51642 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CntfP51642 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
CntfP51642 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CntfP51642 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms