Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ptx3P48759 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ptx3P48759 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Gm15429-201ENSMUST00000151268 798 ntBASIC12.67□□□□□ -0.38
Ptx3P48759 Gm27892-201ENSMUST00000185017 106 ntBASIC12.67□□□□□ -0.38
Ptx3P48759 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.67□□□□□ -0.38
Ptx3P48759 Gm5356-201ENSMUST00000093326 615 ntBASIC12.67□□□□□ -0.38
Ptx3P48759 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.67□□□□□ -0.38
Ptx3P48759 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptx3P48759 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ptx3P48759 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ptx3P48759 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ptx3P48759 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Matn2-206ENSMUST00000228570 2798 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ptx3P48759 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ptx3P48759 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ptx3P48759 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Gm15376-201ENSMUST00000122258 783 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Gm8602-201ENSMUST00000184045 607 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.66□□□□□ -0.38
Ptx3P48759 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ptx3P48759 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.66□□□□□ -0.38
Ptx3P48759 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptx3P48759 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Ptx3P48759 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Gm15824-201ENSMUST00000119516 955 ntBASIC12.65□□□□□ -0.38
Ptx3P48759 Mir1894-201ENSMUST00000122802 81 ntBASIC12.65□□□□□ -0.38
Ptx3P48759 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.65□□□□□ -0.38
Ptx3P48759 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.65□□□□□ -0.38
Ptx3P48759 Gm38223-201ENSMUST00000194484 695 ntBASIC12.65□□□□□ -0.38
Ptx3P48759 Gm44719-201ENSMUST00000206404 149 ntBASIC12.65□□□□□ -0.38
Ptx3P48759 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ptx3P48759 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptx3P48759 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms